⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies

A route planner for DNA assembly

A PCR primer tool for DNA assembly flows

🌸 Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.

🎨 Python library to plot multi-part genetic constructs

a DNA assembly library

🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

Batch domestication of genetic parts with Python

💫 Computer-aided DNA assembly validation and identification from restriction digests.

🔗 Short overhangs design for DNA assembly

🐾 DNA overhang misannealing data for Python

Fake genomes, fake sequencing, real insights.

The repository contains the source code of the NanoForms server (Czmil et al. NanoForms: an integrated server for processing, analysis and assembly of raw sequencing data of microbial genomes, from Oxford Nanopore technology. PeerJ, 2022). It is meant to be the source for standalone server installation. https://doi.org/10.7717/peerj.13056

🔮 Predict DNA assembly clone validity rates - powered by Kappa

📚 Shared slideshows, courses, etc. from the EGF

✂️ Design compact restriction sites arrays (python utility)

Download the full iGEM database of parts

👉 EGF Design and Build, the Foundry's DNA design ordering portal

DNAda is a web application that integrates the J5 DNA assembly software with robotic liquid handlers

Open source web app for DNA design and management